ALENA SHKUMATAVA

Doctor

Recherche - Paris

Spécialités / domaines

Development, cancer, genetics and epigenetics

Functions within Institut Curie:

Team Leader

Long Intervening Noncoding RNAs (lincRNAs) in Vertebrate Development
Unit : Genetics and Developmental Biology (UMR3215 / U934)

Publications

2021

lncRNAs in development and differentiation: from sequence motifs to functional characterization

Development

Florian Constanty, Alena Shkumatava

(2021 01 Jan)

2020

SPOCD1 is an essential executor of piRNA-directed de novo DNA methylation

Nature

Ansgar Zoch, Tania Auchynnikava, Rebecca V. Berrens, Yuka Kabayama, Theresa Schöpp, Madeleine Heep, Lina Vasiliauskaitė, Yuvia A. Pérez-Rico, Atlanta G. Cook, Alena Shkumatava, Juri Rappsilber, Robin C. Allshire, Dónal O’Carroll

(2020 27 Aug)

2020

Demarcation of Topologically Associating Domains Is Uncoupled from Enriched CTCF Binding in Developing Zebrafish

iScience

Yuvia A. Pérez-Rico, Emmanuel Barillot, Alena Shkumatava

(2020 01 May)

2020

In-Cell Discovery of RNA–Protein Interactions

Trends in Biochemical Sciences

Xavier Sabaté-Cadenas, Alena Shkumatava

(2020 01 Mar)

2019

In-cell identification and measurement of RNA-protein interactions

Nature Communications

Antoine Graindorge, Inês Pinheiro, Anna Nawrocka, Allison C. Mallory, Peter Tsvetkov, Noa Gil, Carlo Carolis, Frank Buchholz, Igor Ulitsky, Edith Heard, Mikko Taipale, Alena Shkumatava

(2019 01 Dec)

2019

Strategies for genetic inactivation of long noncoding RNAs in zebrafish

RNA

Perrine Lavalou, Helene Eckert, Louise Damy, Florian Constanty, Sara Majello, Angelo Bitetti, Antoine Graindorge, Alena Shkumatava

(2019 01 Aug)

2018

MicroRNA degradation by a conserved target RNA regulates animal behavior

Nature Structural & Molecular Biology

Angelo Bitetti, Allison C. Mallory, Elisabetta Golini, Claudia Carrieri, Héctor Carreño Gutiérrez, Emerald Perlas, Yuvia A. Pérez-Rico, Glauco P. Tocchini-Valentini, Anton J. Enright, William H. J. Norton, Silvia Mandillo, Dónal O’Carroll, Alena Shkumatava

(2018 01 Mar)

2017

Transposon‐driven transcription is a conserved feature of vertebrate spermatogenesis and transcript evolution

EMBO reports

Matthew P Davis, Claudia Carrieri, Harpreet K Saini, Stijn Dongen, Tommaso Leonardi, Giovanni Bussotti, Jack M Monahan, Tania Auchynnikava, Angelo Bitetti, Juri Rappsilber, Robin C Allshire, Alena Shkumatava, Dónal O'Carroll, Anton J Enright

(2017 01 Jul)

2017

Comparative analyses of super-enhancers reveal conserved elements in vertebrate genomes

Genome Research

Yuvia A. Pérez-Rico, Valentina Boeva, Allison C. Mallory, Angelo Bitetti, Sara Majello, Emmanuel Barillot, Alena Shkumatava

(2017 01 Feb)

2016

Evaluation of off-target and on-target scoring algorithms and integration into the guide RNA selection tool CRISPOR

Genome Biology

Maximilian Haeussler, Kai Schönig, Hélène Eckert, Alexis Eschstruth, Joffrey Mianné, Jean-Baptiste Renaud, Sylvie Schneider-Maunoury, Alena Shkumatava, Lydia Teboul, Jim Kent, Jean-Stephane Joly, Jean-Paul Concordet

(2016 01 Dec)